Genome Meta Information: Streptococcus oralis SK304 (GCA_000287715.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000287715.1 | ||
| HOMD Taxon-ID | HMT-0071 | ||
| Species Name (in use by HOMD) | Streptococcus oralis | ||
| Organism Name (as deposited) | HMT-071 Streptococcus oralis subsp. tigurinus SK304 | ||
| Strain or Isolate | SK304 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus oralis_Y |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 33 | ||
| Contigs |
|
||
| Total Sequence Length | 2,020,585 (bp) | ||
| GC Percentage | 40.69 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/715/GCA_000287715.1_SoralisSK304v1.0 | ||
| CDS | 1972 | ||
| Genes | 2077 | ||
| mRNA | 2077 | ||
| misc RNA | 72 | ||
| rRNA | 1 | ||
| tRNA | 31 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 93.59 % | ||
| CheckM Completeness | 99.26 % | ||
| CheckM Contamination | 0.09 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2) OpenAnvi`o (Interactive) OpenSVG (Preview) |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | SoralisSK304v1.0 |
| GenBank Assembly Accession | GCA_000287715.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000287715.1 [NCBI] |
| BioSample | SAMN00829137 [NCBI] |
| BioProject | PRJNA89615 [NCBI] |
| Submitter | JCVI |
| Submission Date | 2012-03-20T15:51:05.690 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | ALJN01 |
| NCBI TaxID | 1161421 |
| Isolation Source | |
| Geo Location | not determined |
