Genome Meta Information: Mycoplasmoides genitalium M2288 (GCA_000292505.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000292505.1 | ||
| HOMD Taxon-ID | HMT-0616 | ||
| Species Name (in use by HOMD) | Mycoplasmoides genitalium | ||
| Organism Name (as deposited) | HMT-616 Mycoplasmoides genitalium M2288 | ||
| Strain or Isolate | M2288 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Mycoplasmatales;f__Mycoplasmoidaceae;g__Mycoplasmoides; s__Mycoplasmoides genitalium |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 579,558 (bp) | ||
| GC Percentage | 31.67 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/505/GCA_000292505.1_ASM29250v1 | ||
| CDS | 1004 | ||
| Genes | 1046 | ||
| mRNA | 1046 | ||
| misc RNA | 2 | ||
| rRNA | 3 | ||
| tRNA | 36 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.48 % | ||
| CheckM Completeness | 94.7 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM29250v1 |
| GenBank Assembly Accession | GCA_000292505.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000292505.1 [NCBI] |
| BioSample | SAMN02603574 [NCBI] |
| BioProject | PRJNA39707 [NCBI] |
| Submitter | LSU Health Sciences Center |
| Submission Date | 2014-01-30T14:21:39.950 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 662947 |
| Isolation Source | |
| Geo Location | |
