Genome Meta Information: Slackia exigua CM382 (GCA_000293015.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000293015.1 | ||
| HOMD Taxon-ID | HMT-0602 | ||
| Species Name (in use by HOMD) | Slackia exigua | ||
| Organism Name (as deposited) | HMT-602 Slackia exigua CM382 | ||
| Strain or Isolate | CM382 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Coriobacteriia;o__Coriobacteriales;f__Eggerthellaceae;g__Slackia; s__Slackia exigua |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 33 | ||
| Contigs |
|
||
| Total Sequence Length | 2,051,910 (bp) | ||
| GC Percentage | 61.97 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/015/GCA_000293015.1_SspCM382v1.0 | ||
| CDS | 1691 | ||
| Genes | 1752 | ||
| mRNA | 1752 | ||
| misc RNA | 9 | ||
| rRNA | 3 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.51 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | SspCM382v1.0 |
| GenBank Assembly Accession | GCA_000293015.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000293015.1 [NCBI] |
| BioSample | SAMN00828797 [NCBI] |
| BioProject | PRJNA78589 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2012-03-15T11:57:01.640 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | ALNO01 |
| NCBI TaxID | 1111137 |
| Isolation Source | |
| Geo Location | not determined |
