Genome Meta Information: Pseudomonas oleovorans CECT5344 (GCA_000297075.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000297075.2 | ||
| HOMD Taxon-ID | HMT-0740 | ||
| Species Name (in use by HOMD) | Pseudomonas oleovorans | ||
| Organism Name (as deposited) | HMT-740 Pseudomonas oleovorans CECT5344 | ||
| Strain or Isolate | CECT5344 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E; s__Pseudomonas_E oleovorans |
||
| Sequencing Technology | |||
| Genome Coverage | 40 | ||
| Contigs |
|
||
| Total Sequence Length | 4,686,340 (bp) | ||
| GC Percentage | 62.34 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/075/GCA_000297075.2_Ppseudo_final | ||
| CDS | 4428 | ||
| Genes | 4732 | ||
| mRNA | 4732 | ||
| misc RNA | 223 | ||
| rRNA | 12 | ||
| tRNA | 68 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.11 % | ||
| CheckM Completeness | 99.25 % | ||
| CheckM Contamination | 1.66 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Ppseudo_final |
| GenBank Assembly Accession | GCA_000297075.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000297075.2 [NCBI] |
| BioSample | SAMEA4532340 [NCBI] |
| BioProject | PRJEB27 [NCBI] |
| Submitter | CeBiTec, Bielefeld University |
| Submission Date | 2016-11-03T09:06:38.003 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1182590 |
| Isolation Source | |
| Geo Location | |
