Genome Meta Information: Streptococcus oralis F0441 (GCA_000314775.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000314775.2 | ||
| HOMD Taxon-ID | HMT-0071 | ||
| Species Name (in use by HOMD) | Streptococcus oralis | ||
| Organism Name (as deposited) | HMT-071 Streptococcus oralis subsp. tigurinus F0441 | ||
| Strain or Isolate | F0441 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus sp000314775 |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 143 | ||
| Contigs |
|
||
| Total Sequence Length | 2,000,650 (bp) | ||
| GC Percentage | 41.72 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/775/GCA_000314775.2_Strept_sp_F0441_V1 | ||
| CDS | 1898 | ||
| Genes | 2025 | ||
| mRNA | 2025 | ||
| misc RNA | 49 | ||
| rRNA | 12 | ||
| tRNA | 65 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2) OpenAnvi`o (Interactive) OpenSVG (Preview) |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Strept_sp_F0441_V1 |
| GenBank Assembly Accession | GCA_000314775.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000314775.2 [NCBI] |
| BioSample | SAMN02463945 [NCBI] |
| BioProject | PRJNA64899 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:58.247 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AGZY01 |
| NCBI TaxID | 999424 |
| Isolation Source | |
| Geo Location | not determined |
