Genome Meta Information: Selenomonas sp. HMT-133 F0473 (GCA_000315545.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000315545.1 | ||
| HOMD Taxon-ID | HMT-0133 | ||
| Species Name (in use by HOMD) | Selenomonas sp. HMT-133 | ||
| Organism Name (as deposited) | HMT-133 Selenomonas sp. HMT-133 F0473 | ||
| Strain or Isolate | F0473 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Centipeda; s__Centipeda sp000315545 |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 227 | ||
| Contigs |
|
||
| Total Sequence Length | 2,067,540 (bp) | ||
| GC Percentage | 58.74 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/545/GCA_000315545.1_Seleno_sp_F0473_V1 | ||
| CDS | 1883 | ||
| Genes | 1962 | ||
| mRNA | 1962 | ||
| misc RNA | 19 | ||
| rRNA | 6 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.98 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Seleno_sp_F0473_V1 |
| GenBank Assembly Accession | GCA_000315545.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000315545.1 [NCBI] |
| BioSample | SAMN02463944 [NCBI] |
| BioProject | PRJNA64897 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:58.157 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AGZT01 |
| NCBI TaxID | 999423 |
| Isolation Source | |
| Geo Location | not determined |
