Genome Meta Information: Mycolicibacterium neoaurum VKM Ac-1815D (GCA_000317305.3)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000317305.3 | ||
| HOMD Taxon-ID | HMT-0692 | ||
| Species Name (in use by HOMD) | Mycolicibacterium neoaurum | ||
| Organism Name (as deposited) | HMT-692 Mycolicibacterium neoaurum VKM Ac-1815D | ||
| Strain or Isolate | VKM Ac-1815D | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium; s__Mycobacterium neoaurum_A |
||
| Sequencing Technology | Illumina GAIIx; Illumina HiSeq | ||
| Genome Coverage | 200 | ||
| Contigs |
|
||
| Total Sequence Length | 5,421,267 (bp) | ||
| GC Percentage | 66.89 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/305/GCA_000317305.3_ASM31730v3 | ||
| CDS | 5088 | ||
| Genes | 5173 | ||
| mRNA | 5173 | ||
| misc RNA | 26 | ||
| rRNA | 6 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 92.87 % | ||
| CheckM Completeness | 99.6 % | ||
| CheckM Contamination | 1.82 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM31730v3 |
| GenBank Assembly Accession | GCA_000317305.3 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000317305.3 [NCBI] |
| BioSample | SAMN02641502 [NCBI] |
| BioProject | PRJNA177066 [NCBI] |
| Submitter | Laboratory of microbiological transformation of organic compounds, G.K.Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences |
| Submission Date | 2014-02-13T12:40:40.050 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 700508 |
| Isolation Source | missing |
| Geo Location | missing |
