Genome Meta Information: Peptostreptococcus anaerobius VPI 4330 (GCA_000318115.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000318115.1 | ||
| HOMD Taxon-ID | HMT-0542 | ||
| Species Name (in use by HOMD) | Peptostreptococcus anaerobius | ||
| Organism Name (as deposited) | HMT-542 Peptostreptococcus anaerobius VPI 4330 | ||
| Strain or Isolate | VPI 4330 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Peptostreptococcus; s__Peptostreptococcus anaerobius |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 501 | ||
| Contigs |
|
||
| Total Sequence Length | 1,988,451 (bp) | ||
| GC Percentage | 36.02 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/115/GCA_000318115.1_ASM31811v1 | ||
| CDS | 1851 | ||
| Genes | 1911 | ||
| mRNA | 1911 | ||
| misc RNA | 31 | ||
| rRNA | 3 | ||
| tRNA | 25 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.91 % | ||
| CheckM Completeness | 90.77 % | ||
| CheckM Contamination | 1.58 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM31811v1 |
| GenBank Assembly Accession | GCA_000318115.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000318115.1 [NCBI] |
| BioSample | SAMN02436860 [NCBI] |
| BioProject | PRJNA67203 [NCBI] |
| Submitter | Washington University Genome Center |
| Submission Date | 2013-12-04T15:03:56.910 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AMEL01 |
| NCBI TaxID | 1035196 |
| Isolation Source | oral cavity |
| Geo Location | |
