Genome Meta Information: Corynebacterium durum F0235 (GCA_000318135.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000318135.1 | ||
| HOMD Taxon-ID | HMT-0595 | ||
| Species Name (in use by HOMD) | Corynebacterium durum | ||
| Organism Name (as deposited) | HMT-595 Corynebacterium durum F0235 | ||
| Strain or Isolate | F0235 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium durum |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 226 | ||
| Contigs |
|
||
| Total Sequence Length | 2,809,576 (bp) | ||
| GC Percentage | 56.85 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/135/GCA_000318135.1_ASM31813v1 | ||
| CDS | 2579 | ||
| Genes | 2646 | ||
| mRNA | 2646 | ||
| misc RNA | 15 | ||
| rRNA | 2 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.32 % | ||
| CheckM Completeness | 97.57 % | ||
| CheckM Contamination | 0.56 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM31813v1 |
| GenBank Assembly Accession | GCA_000318135.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000318135.1 [NCBI] |
| BioSample | SAMN02436928 [NCBI] |
| BioProject | PRJNA67201 [NCBI] |
| Submitter | Washington University Genome Center |
| Submission Date | 2013-12-04T15:04:01.563 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AMEM01 |
| NCBI TaxID | 1035195 |
| Isolation Source | oral cavity |
| Geo Location | |
