Taxon Table | Genome Table
Genome Meta Information:
Prevotella
nigrescens
F0103 (GCA_000336235.1)
| HOMD Genome-ID |
GCA_000336235.1
|
| HOMD Taxon-ID |
HMT-0693
|
| Species Name (in use by HOMD) |
Prevotella nigrescens
|
| Organism Name (as deposited) |
HMT-693 Prevotella nigrescens F0103
|
| Strain or Isolate |
F0103
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella;
s__Prevotella nigrescens |
| Sequencing Technology |
454
|
| Genome Coverage |
35
|
| Contigs |
Number of Contigs: 131
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
3,021,735 (bp) |
| GC Percentage |
42.66
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/235/GCA_000336235.1_Prev_nigr_F0103_V1
|
| CDS |
2663
|
| Genes |
2726
|
| mRNA |
2726
|
| misc RNA |
7
|
| rRNA |
7
|
| tRNA |
48
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
98.11 %
|
| CheckM Completeness |
98.58 %
|
| CheckM Contamination |
0 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
Prev_nigr_F0103_V1
|
| GenBank Assembly Accession |
GCA_000336235.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_000336235.1
[NCBI]
|
| BioSample |
SAMN02595377
[NCBI]
|
| BioProject |
PRJNA43119
[NCBI]
|
| Submitter |
Broad Institute
|
| Submission Date |
2014-01-23T10:15:18.940
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
ADGJ01
|
| NCBI TaxID |
702439
|
| Isolation Source |
|
| Geo Location |
|
