Genome Meta Information: Micavibrio aeruginosavorus EPB (GCA_000348745.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000348745.1 | ||
| HOMD Taxon-ID | HMT-0330 | ||
| Species Name (in use by HOMD) | Micavibrio aeruginosavorus | ||
| Organism Name (as deposited) | HMT-330 Micavibrio aeruginosavorus EPB | ||
| Strain or Isolate | EPB | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Micavibrionales;f__Micavibrionaceae;g__Micavibrio; s__Micavibrio aeruginosavorus_A |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,458,610 (bp) | ||
| GC Percentage | 54.96 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/745/GCA_000348745.1_ASM34874v1 | ||
| CDS | 2316 | ||
| Genes | 2367 | ||
| mRNA | 2367 | ||
| misc RNA | 6 | ||
| rRNA | 3 | ||
| tRNA | 41 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.69 % | ||
| CheckM Contamination | 0.46 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM34874v1 |
| GenBank Assembly Accession | GCA_000348745.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000348745.1 [NCBI] |
| BioSample | SAMN02604326 [NCBI] |
| BioProject | PRJNA163341 [NCBI] |
| Submitter | Weizmann Institute of Science |
| Submission Date | 2014-01-30T15:13:24.970 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 349215 |
| Isolation Source | |
| Geo Location | |
