Genome Meta Information: Schaalia cardiffensis F0333 (GCA_000364865.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000364865.1 | ||
| HOMD Taxon-ID | HMT-0850 | ||
| Species Name (in use by HOMD) | Schaalia cardiffensis | ||
| Organism Name (as deposited) | HMT-850 Schaalia cardiffensis F0333 | ||
| Strain or Isolate | F0333 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Pauljensenia; s__Pauljensenia cardiffensis |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 34 | ||
| Contigs |
|
||
| Total Sequence Length | 2,214,851 (bp) | ||
| GC Percentage | 61.95 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/865/GCA_000364865.1_ASM36486v1 | ||
| CDS | 1815 | ||
| Genes | 1879 | ||
| mRNA | 1879 | ||
| misc RNA | 10 | ||
| rRNA | 3 | ||
| tRNA | 50 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.94 % | ||
| CheckM Completeness | 99.73 % | ||
| CheckM Contamination | 2.01 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM36486v1 |
| GenBank Assembly Accession | GCA_000364865.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000364865.1 [NCBI] |
| BioSample | SAMN00260255 [NCBI] |
| BioProject | PRJNA53007 [NCBI] |
| Submitter | Baylor College of Medicine |
| Submission Date | 2011-04-26T16:25:23.603 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AQHZ01 |
| NCBI TaxID | 888050 |
| Isolation Source | oral |
| Geo Location | United Kingdom |
