Genome Meta Information: Microbacterium sp. HMT-186 F0373 (GCA_000411455.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000411455.1 | ||
| HOMD Taxon-ID | HMT-0186 | ||
| Species Name (in use by HOMD) | Microbacterium sp. HMT-186 | ||
| Organism Name (as deposited) | HMT-186 Microbacterium sp. HMT-186 F0373 | ||
| Strain or Isolate | F0373 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium; s__Microbacterium sp000411455 |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 139 | ||
| Contigs |
|
||
| Total Sequence Length | 3,168,064 (bp) | ||
| GC Percentage | 69.28 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/455/GCA_000411455.1_Micr_sp_oral_taxon_186_F0373_V1 | ||
| CDS | 3002 | ||
| Genes | 3096 | ||
| mRNA | 3096 | ||
| misc RNA | 12 | ||
| rRNA | 6 | ||
| tRNA | 75 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.46 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Micr_sp_oral_taxon_186_F0373_V |
| GenBank Assembly Accession | GCA_000411455.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000411455.1 [NCBI] |
| BioSample | SAMN02596977 [NCBI] |
| BioProject | PRJNA169458 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2014-01-27T09:49:01.737 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ATCC01 |
| NCBI TaxID | 1203549 |
| Isolation Source | |
| Geo Location | |
