Genome Meta Information: Phocaeicola abscessus F0290 (GCA_000442105.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000442105.1 | ||
| HOMD Taxon-ID | HMT-0272 | ||
| Species Name (in use by HOMD) | Phocaeicola abscessus | ||
| Organism Name (as deposited) | HMT-272 Phocaeicola abscessus F0290 | ||
| Strain or Isolate | F0290 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Phocaeicola; s__Phocaeicola abscessus |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 31 | ||
| Contigs |
|
||
| Total Sequence Length | 2,502,741 (bp) | ||
| GC Percentage | 47.68 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/105/GCA_000442105.1_BactbactF0290v01 | ||
| CDS | 2086 | ||
| Genes | 2142 | ||
| mRNA | 2142 | ||
| misc RNA | 8 | ||
| rRNA | 1 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | BactbactF0290v01 |
| GenBank Assembly Accession | GCA_000442105.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000442105.1 [NCBI] |
| BioSample | SAMN02436397 [NCBI] |
| BioProject | PRJNA53013 [NCBI] |
| Submitter | Baylor College of Medicine |
| Submission Date | 2013-12-04T14:28:21.297 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AUTU01 |
| NCBI TaxID | 888054 |
| Isolation Source | |
| Geo Location | |
