Genome Meta Information: Clostridiales [F3 G1] bacterium HMT-876 F0540 (GCA_000466585.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000466585.1 | ||
| HOMD Taxon-ID | HMT-0876 | ||
| Species Name (in use by HOMD) | Clostridiales [F3 G1] bacterium HMT-876 | ||
| Organism Name (as deposited) | HMT-876 Clostridiales [F3 G1] bacterium HMT-876 F0540 | ||
| Strain or Isolate | F0540 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium_AT; s__Clostridium_AT sp000466585 |
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| Sequencing Technology | Illumina | ||
| Genome Coverage | 83 | ||
| Contigs |
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| Total Sequence Length | 4,767,532 (bp) | ||
| GC Percentage | 32.98 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/585/GCA_000466585.1_ASM46658v1 | ||
| CDS | 4599 | ||
| Genes | 4704 | ||
| mRNA | 4704 | ||
| misc RNA | 74 | ||
| rRNA | 2 | ||
| tRNA | 28 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM46658v1 |
| GenBank Assembly Accession | GCA_000466585.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000466585.1 [NCBI] |
| BioSample | SAMN02436756 [NCBI] |
| BioProject | PRJNA198885 [NCBI] |
| Submitter | Washington University |
| Submission Date | 2013-12-04T15:03:50.960 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AWSZ01 |
| NCBI TaxID | 1321778 |
| Isolation Source | oral cavity- mouth |
| Geo Location | |
