Genome Meta Information: Peptoniphilaceae [G1] bacterium HMT-113 W5053 (GCA_000467935.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000467935.1 | ||
| HOMD Taxon-ID | HMT-0113 | ||
| Species Name (in use by HOMD) | Peptoniphilaceae [G1] bacterium HMT-113 | ||
| Organism Name (as deposited) | HMT-113 Peptoniphilaceae [G1] bacterium HMT-113 W5053 | ||
| Strain or Isolate | W5053 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Tissierellales;f__Peptoniphilaceae;g__W5053; s__W5053 sp000467935 |
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| Sequencing Technology | Illumina | ||
| Genome Coverage | 190 | ||
| Contigs |
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| Total Sequence Length | 2,088,253 (bp) | ||
| GC Percentage | 37.2 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/935/GCA_000467935.1_ASM46793v1 | ||
| CDS | 2015 | ||
| Genes | 2092 | ||
| mRNA | 2092 | ||
| misc RNA | 31 | ||
| rRNA | 3 | ||
| tRNA | 42 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM46793v1 |
| GenBank Assembly Accession | GCA_000467935.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000467935.1 [NCBI] |
| BioSample | SAMN02436814 [NCBI] |
| BioProject | PRJNA198890 [NCBI] |
| Submitter | Washington University |
| Submission Date | 2013-12-04T15:03:54.277 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AWVB01 |
| NCBI TaxID | 1321784 |
| Isolation Source | oral cavity- mouth |
| Geo Location | |
