Genome Meta Information: Levilactobacillus brevis ATCC 14869 (GCA_000469365.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000469365.1 | ||
| HOMD Taxon-ID | HMT-0558 | ||
| Species Name (in use by HOMD) | Levilactobacillus brevis | ||
| Organism Name (as deposited) | HMT-558 Levilactobacillus brevis ATCC 14869 | ||
| Strain or Isolate | ATCC 14869 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Levilactobacillus; s__Levilactobacillus brevis |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 119 | ||
| Contigs |
|
||
| Total Sequence Length | 2,473,047 (bp) | ||
| GC Percentage | 46.06 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/365/GCA_000469365.1_ASM46936v1 | ||
| CDS | 2396 | ||
| Genes | 2481 | ||
| mRNA | 2481 | ||
| misc RNA | 30 | ||
| rRNA | 3 | ||
| tRNA | 51 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 96.88 % | ||
| CheckM Contamination | 5.84 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM46936v1 |
| GenBank Assembly Accession | GCA_000469365.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000469365.1 [NCBI] |
| BioSample | SAMN02436750 [NCBI] |
| BioProject | PRJNA38325 [NCBI] |
| Submitter | WUGSC |
| Submission Date | 2013-12-04T15:03:50.606 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AWVK01 |
| NCBI TaxID | 649758 |
| Isolation Source | gastrointestinal tract |
| Geo Location | |
