Genome Meta Information: Mitsuokella sp. HMT-131 W9106 (GCA_000469545.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000469545.1 | ||
| HOMD Taxon-ID | HMT-0131 | ||
| Species Name (in use by HOMD) | Mitsuokella sp. HMT-131 | ||
| Organism Name (as deposited) | HMT-131 Mitsuokella sp. HMT-131 W9106 | ||
| Strain or Isolate | W9106 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__AWVT01; s__AWVT01 sp000469545 |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 172 | ||
| Contigs |
|
||
| Total Sequence Length | 2,313,357 (bp) | ||
| GC Percentage | 56.59 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/545/GCA_000469545.1_ASM46954v1 | ||
| CDS | 2112 | ||
| Genes | 2186 | ||
| mRNA | 2186 | ||
| misc RNA | 20 | ||
| rRNA | 3 | ||
| tRNA | 50 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM46954v1 |
| GenBank Assembly Accession | GCA_000469545.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000469545.1 [NCBI] |
| BioSample | SAMN02436729 [NCBI] |
| BioProject | PRJNA198888 [NCBI] |
| Submitter | Washington University |
| Submission Date | 2013-12-04T15:03:49.430 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AWVT01 |
| NCBI TaxID | 1321781 |
| Isolation Source | oral cavity- mouth |
| Geo Location | |
