Genome Meta Information: Segatella salivae F0493 (GCA_000477535.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000477535.1 | ||
| HOMD Taxon-ID | HMT-0307 | ||
| Species Name (in use by HOMD) | Segatella salivae | ||
| Organism Name (as deposited) | HMT-307 Segatella salivae F0493 | ||
| Strain or Isolate | F0493 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella salivae |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 52 | ||
| Contigs |
|
||
| Total Sequence Length | 3,099,908 (bp) | ||
| GC Percentage | 41.69 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/535/GCA_000477535.1_PsaliF0493v1.0 | ||
| CDS | 2584 | ||
| Genes | 2651 | ||
| mRNA | 2651 | ||
| misc RNA | 11 | ||
| rRNA | 3 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.03 % | ||
| CheckM Completeness | 99.24 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | PsaliF0493v1.0 |
| GenBank Assembly Accession | GCA_000477535.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000477535.1 [NCBI] |
| BioSample | SAMN02339451 [NCBI] |
| BioProject | PRJNA217512 [NCBI] |
| Submitter | The J. Craig Venter Institute |
| Submission Date | 2013-08-29T13:00:04.333 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AWGW01 |
| NCBI TaxID | 1395125 |
| Isolation Source | |
| Geo Location | USA |
