Genome Meta Information: Staphylococcus capitis CR01 (GCA_000499705.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000499705.1 | ||
| HOMD Taxon-ID | HMT-0116 | ||
| Species Name (in use by HOMD) | Staphylococcus capitis | ||
| Organism Name (as deposited) | HMT-116 Staphylococcus capitis CR01 | ||
| Strain or Isolate | CR01 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus capitis |
||
| Sequencing Technology | |||
| Genome Coverage | 48 | ||
| Contigs |
|
||
| Total Sequence Length | 2,503,772 (bp) | ||
| GC Percentage | 32.86 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/705/GCA_000499705.1_ScapHOJ_3778_PRJEB1494 | ||
| CDS | 2386 | ||
| Genes | 2498 | ||
| mRNA | 2498 | ||
| misc RNA | 48 | ||
| rRNA | 4 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.34 % | ||
| CheckM Contamination | 0.36 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ScapHOJ_3778_PRJEB1494 |
| GenBank Assembly Accession | GCA_000499705.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000499705.1 [NCBI] |
| BioSample | SAMEA3138827 [NCBI] |
| BioProject | PRJEB1494 [NCBI] |
| Submitter | HOSPICES CIVILS DE LYON |
| Submission Date | 2014-11-21T08:59:09.237 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | CBUB01 |
| NCBI TaxID | 1296619 |
| Isolation Source | |
| Geo Location | |
