Genome Meta Information: Prevotella nigrescens CC14M (GCA_000507825.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000507825.1 | ||
| HOMD Taxon-ID | HMT-0693 | ||
| Species Name (in use by HOMD) | Prevotella nigrescens | ||
| Organism Name (as deposited) | HMT-693 Prevotella nigrescens CC14M | ||
| Strain or Isolate | CC14M | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella nigrescens |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 107 | ||
| Contigs |
|
||
| Total Sequence Length | 2,986,732 (bp) | ||
| GC Percentage | 43.17 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/825/GCA_000507825.1_Prev_nigr_CC14M_V1 | ||
| CDS | 2591 | ||
| Genes | 2653 | ||
| mRNA | 2653 | ||
| misc RNA | 9 | ||
| rRNA | 9 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.18 % | ||
| CheckM Completeness | 99.64 % | ||
| CheckM Contamination | 0.36 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Prev_nigr_CC14M_V1 |
| GenBank Assembly Accession | GCA_000507825.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000507825.1 [NCBI] |
| BioSample | SAMN01162077 [NCBI] |
| BioProject | PRJNA71565 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2012-09-05T09:05:36.777 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AZJH01 |
| NCBI TaxID | 1073366 |
| Isolation Source | missing |
| Geo Location | missing |
