Genome Meta Information: Bacteroides pyogenes JCM 10003 (GCA_000511775.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000511775.1 | ||
| HOMD Taxon-ID | HMT-0787 | ||
| Species Name (in use by HOMD) | Bacteroides pyogenes | ||
| Organism Name (as deposited) | HMT-787 Bacteroides pyogenes JCM 10003 | ||
| Strain or Isolate | JCM 10003 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides; s__Bacteroides pyogenes_A |
||
| Sequencing Technology | Ion PGM | ||
| Genome Coverage | 36.8 | ||
| Contigs |
|
||
| Total Sequence Length | 3,379,354 (bp) | ||
| GC Percentage | 46.22 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/775/GCA_000511775.1_ASM51177v1 | ||
| CDS | 3292 | ||
| Genes | 3381 | ||
| mRNA | 3381 | ||
| misc RNA | 30 | ||
| rRNA | 3 | ||
| tRNA | 55 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.96 % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM51177v1 |
| GenBank Assembly Accession | GCA_000511775.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000511775.1 [NCBI] |
| BioSample | SAMD00016596 [NCBI] |
| BioProject | PRJDB560 [NCBI] |
| Submitter | The University of Tokyo |
| Submission Date | 2014-03-26T08:16:35.580 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | BAIU01 |
| NCBI TaxID | 1235813 |
| Isolation Source | |
| Geo Location | |
