Genome Meta Information: Lachnoanaerobaculum sp. HMT-083 MSX33 (GCA_000512995.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000512995.1 | ||
| HOMD Taxon-ID | HMT-0083 | ||
| Species Name (in use by HOMD) | Lachnoanaerobaculum sp. HMT-083 | ||
| Organism Name (as deposited) | HMT-083 Lachnoanaerobaculum sp. HMT-083 MSX33 | ||
| Strain or Isolate | MSX33 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Lachnoanaerobaculum; s__Lachnoanaerobaculum sp000296385 |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 91 | ||
| Contigs |
|
||
| Total Sequence Length | 2,871,049 (bp) | ||
| GC Percentage | 36.21 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/995/GCA_000512995.1_LspMSX33v1.0 | ||
| CDS | 2617 | ||
| Genes | 2683 | ||
| mRNA | 2683 | ||
| misc RNA | 17 | ||
| rRNA | 2 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.38 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | LspMSX33v1.0 |
| GenBank Assembly Accession | GCA_000512995.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000512995.1 [NCBI] |
| BioSample | SAMN02597440 [NCBI] |
| BioProject | PRJNA165899 [NCBI] |
| Submitter | JCVI |
| Submission Date | 2014-01-27T12:59:06.633 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AZXX01 |
| NCBI TaxID | 936596 |
| Isolation Source | |
| Geo Location | |
