Genome Meta Information: Prevotella melaninogenica ICM33 (GCA_000517825.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000517825.1 | ||
| HOMD Taxon-ID | HMT-0469 | ||
| Species Name (in use by HOMD) | Prevotella melaninogenica | ||
| Organism Name (as deposited) | HMT-469 Prevotella melaninogenica ICM33 | ||
| Strain or Isolate | ICM33 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella melaninogenica |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 81 | ||
| Contigs |
|
||
| Total Sequence Length | 3,192,877 (bp) | ||
| GC Percentage | 40.97 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/825/GCA_000517825.1_PspICM33v1.0 | ||
| CDS | 2524 | ||
| Genes | 2582 | ||
| mRNA | 2582 | ||
| misc RNA | 10 | ||
| rRNA | 3 | ||
| tRNA | 44 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.29 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | PspICM33v1.0 |
| GenBank Assembly Accession | GCA_000517825.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000517825.1 [NCBI] |
| BioSample | SAMN02597447 [NCBI] |
| BioProject | PRJNA165919 [NCBI] |
| Submitter | JCVI |
| Submission Date | 2014-01-27T12:59:08.210 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JACD01 |
| NCBI TaxID | 1161412 |
| Isolation Source | |
| Geo Location | |
