Genome Meta Information: Shuttleworthia satelles MSX8B (GCA_000524295.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000524295.1 | ||
| HOMD Taxon-ID | HMT-0095 | ||
| Species Name (in use by HOMD) | Shuttleworthia satelles | ||
| Organism Name (as deposited) | HMT-095 Shuttleworthia satelles MSX8B | ||
| Strain or Isolate | MSX8B | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Shuttleworthia; s__Shuttleworthia satelles |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 81 | ||
| Contigs |
|
||
| Total Sequence Length | 2,102,620 (bp) | ||
| GC Percentage | 51.77 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/295/GCA_000524295.1_SspMSX8Bv1.0 | ||
| CDS | 1845 | ||
| Genes | 1909 | ||
| mRNA | 1909 | ||
| misc RNA | 16 | ||
| rRNA | 2 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 97.14 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | SspMSX8Bv1.0 |
| GenBank Assembly Accession | GCA_000524295.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000524295.1 [NCBI] |
| BioSample | SAMN02641571 [NCBI] |
| BioProject | PRJNA165923 [NCBI] |
| Submitter | JCVI |
| Submission Date | 2014-02-13T12:40:46.093 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAQT01 |
| NCBI TaxID | 936574 |
| Isolation Source | missing |
| Geo Location | missing |
