Genome Meta Information: Brochothrix thermosphacta FSL F6-1036 (GCA_000525935.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000525935.1 | ||
| HOMD Taxon-ID | HMT-0241 | ||
| Species Name (in use by HOMD) | Brochothrix thermosphacta | ||
| Organism Name (as deposited) | HMT-241 Brochothrix thermosphacta FSL F6-1036 | ||
| Strain or Isolate | FSL F6-1036 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Listeriaceae;g__Brochothrix; s__Brochothrix thermosphacta |
||
| Sequencing Technology | IonTorrent | ||
| Genome Coverage | 47.01 | ||
| Contigs |
|
||
| Total Sequence Length | 2,529,115 (bp) | ||
| GC Percentage | 36.35 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/935/GCA_000525935.1_BthermosphactaTYPE | ||
| CDS | 2844 | ||
| Genes | 2975 | ||
| mRNA | 2975 | ||
| misc RNA | 49 | ||
| rRNA | 10 | ||
| tRNA | 71 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.92 % | ||
| CheckM Completeness | 84.8 % | ||
| CheckM Contamination | 1.54 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | BthermosphactaTYPE |
| GenBank Assembly Accession | GCA_000525935.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000525935.1 [NCBI] |
| BioSample | SAMN02641490 [NCBI] |
| BioProject | PRJNA182539 [NCBI] |
| Submitter | Cornell University |
| Submission Date | 2014-02-13T12:40:38.806 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AODI01 |
| NCBI TaxID | 1121126 |
| Isolation Source | missing |
| Geo Location | missing |
