Genome Meta Information: Staphylococcus capitis TE8 (GCA_000692055.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000692055.1 | ||
| HOMD Taxon-ID | HMT-0116 | ||
| Species Name (in use by HOMD) | Staphylococcus capitis | ||
| Organism Name (as deposited) | HMT-116 Staphylococcus capitis TE8 | ||
| Strain or Isolate | TE8 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus capitis |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 109 | ||
| Contigs |
|
||
| Total Sequence Length | 2,516,639 (bp) | ||
| GC Percentage | 32.85 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/055/GCA_000692055.1_Staphylococcus_sp._strain_TE8_genome | ||
| CDS | 2442 | ||
| Genes | 2555 | ||
| mRNA | 2555 | ||
| misc RNA | 50 | ||
| rRNA | 4 | ||
| tRNA | 58 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.31 % | ||
| CheckM Contamination | 0.36 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Staphylococcus sp. strain TE8 |
| GenBank Assembly Accession | GCA_000692055.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000692055.1 [NCBI] |
| BioSample | SAMN02736786 [NCBI] |
| BioProject | PRJNA240948 [NCBI] |
| Submitter | Institute of Genomics and Integrative Biology |
| Submission Date | 2014-04-24T07:32:33.153 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JMGB01 |
| NCBI TaxID | 1472720 |
| Isolation Source | Healthy human skin surface |
| Geo Location | India: New Delhi |
