Genome Meta Information: Neisseria lactamica ATCC 23970 (GCA_000741965.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000741965.1 | ||
| HOMD Taxon-ID | HMT-0649 | ||
| Species Name (in use by HOMD) | Neisseria lactamica | ||
| Organism Name (as deposited) | HMT-649 Neisseria lactamica ATCC 23970 | ||
| Strain or Isolate | ATCC 23970 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria lactamica |
||
| Sequencing Technology | 454; Illumina | ||
| Genome Coverage | 337 | ||
| Contigs |
|
||
| Total Sequence Length | 2,182,033 (bp) | ||
| GC Percentage | 52.18 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/965/GCA_000741965.1_ASM74196v1 | ||
| CDS | 1992 | ||
| Genes | 2084 | ||
| mRNA | 2084 | ||
| misc RNA | 20 | ||
| rRNA | 12 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 98.84 % | ||
| CheckM Contamination | 0.3 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM74196v1 |
| GenBank Assembly Accession | GCA_000741965.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000741965.1 [NCBI] |
| BioSample | SAMN02870721 [NCBI] |
| BioProject | PRJNA244570 [NCBI] |
| Submitter | Los Alamos National Laboratory |
| Submission Date | 2014-06-24T16:10:48.556 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JOVI01 |
| NCBI TaxID | 546265 |
| Isolation Source | unknown |
| Geo Location | unknown |
