Genome Meta Information: Corynebacterium mucifaciens IMMIB RIV-2301 (GCA_000747315.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000747315.1 | ||
| HOMD Taxon-ID | HMT-0835 | ||
| Species Name (in use by HOMD) | Corynebacterium mucifaciens | ||
| Organism Name (as deposited) | HMT-835 Corynebacterium mucifaciens IMMIB RIV-2301 | ||
| Strain or Isolate | IMMIB RIV-2301 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium mucifaciens |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 370.5 | ||
| Contigs |
|
||
| Total Sequence Length | 2,328,278 (bp) | ||
| GC Percentage | 65.01 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/315/GCA_000747315.1_ASM74731v1 | ||
| CDS | 2295 | ||
| Genes | 2370 | ||
| mRNA | 2370 | ||
| misc RNA | 9 | ||
| rRNA | 12 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 97.07 % | ||
| CheckM Contamination | 0.45 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM74731v1 |
| GenBank Assembly Accession | GCA_000747315.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000747315.1 [NCBI] |
| BioSample | SAMN02953970 [NCBI] |
| BioProject | PRJNA257688 [NCBI] |
| Submitter | Bielefeld University |
| Submission Date | 2014-08-07T05:51:08.010 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 401472 |
| Isolation Source | blood culture |
| Geo Location | Germany: Bonn |
