Genome Meta Information: Anaerococcus lactolyticus S7-1-13 (GCA_000758765.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000758765.1 | ||
| HOMD Taxon-ID | HMT-0859 | ||
| Species Name (in use by HOMD) | Anaerococcus lactolyticus | ||
| Organism Name (as deposited) | HMT-859 Anaerococcus lactolyticus S7-1-13 | ||
| Strain or Isolate | S7-1-13 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Tissierellales;f__Peptoniphilaceae;g__Anaerococcus; s__Anaerococcus lactolyticus |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 72.39 | ||
| Contigs |
|
||
| Total Sequence Length | 1,936,866 (bp) | ||
| GC Percentage | 34.79 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/765/GCA_000758765.1_04_NF40_HMP1630v01 | ||
| CDS | 1792 | ||
| Genes | 1868 | ||
| mRNA | 1868 | ||
| misc RNA | 28 | ||
| rRNA | 4 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.57 % | ||
| CheckM Completeness | 98.77 % | ||
| CheckM Contamination | 0.39 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 04_NF40_HMP1630v01 |
| GenBank Assembly Accession | GCA_000758765.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000758765.1 [NCBI] |
| BioSample | SAMN02850926 [NCBI] |
| BioProject | PRJNA187461 [NCBI] |
| Submitter | JCVI |
| Submission Date | 2014-06-11T15:29:53.610 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JRMW01 |
| NCBI TaxID | 1284686 |
| Isolation Source | vagina |
| Geo Location | missing |
