Genome Meta Information: Staphylococcus epidermidis SEI (GCA_000759555.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000759555.1 | ||
| HOMD Taxon-ID | HMT-0601 | ||
| Species Name (in use by HOMD) | Staphylococcus epidermidis | ||
| Organism Name (as deposited) | HMT-601 Staphylococcus epidermidis SEI | ||
| Strain or Isolate | SEI | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus epidermidis |
||
| Sequencing Technology | Illumina; 454 | ||
| Genome Coverage | 336 | ||
| Contigs |
|
||
| Total Sequence Length | 2,538,314 (bp) | ||
| GC Percentage | 32.05 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/555/GCA_000759555.1_ASM75955v1 | ||
| CDS | 2345 | ||
| Genes | 2510 | ||
| mRNA | 2510 | ||
| misc RNA | 86 | ||
| rRNA | 19 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.35 % | ||
| CheckM Completeness | 98.03 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM75955v1 |
| GenBank Assembly Accession | GCA_000759555.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000759555.1 [NCBI] |
| BioSample | SAMN02928813 [NCBI] |
| BioProject | PRJNA244351 [NCBI] |
| Submitter | Los Alamos National Laboratory |
| Submission Date | 2014-07-21T14:29:38.480 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1282 |
| Isolation Source | clinical isolate |
| Geo Location | unknown |
