Genome Meta Information: Pseudomonas aeruginosa CCBH4851 (GCA_000763245.3)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000763245.3 | ||
| HOMD Taxon-ID | HMT-0536 | ||
| Species Name (in use by HOMD) | Pseudomonas aeruginosa | ||
| Organism Name (as deposited) | HMT-536 Pseudomonas aeruginosa CCBH4851 | ||
| Strain or Isolate | CCBH4851 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas; s__Pseudomonas aeruginosa |
||
| Sequencing Technology | PacBio; Illumina MiSeq | ||
| Genome Coverage | 78 | ||
| Contigs |
|
||
| Total Sequence Length | 6,834,257 (bp) | ||
| GC Percentage | 66.08 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/245/GCA_000763245.3_ASM76324v3 | ||
| CDS | 6309 | ||
| Genes | 6486 | ||
| mRNA | 6486 | ||
| misc RNA | 90 | ||
| rRNA | 12 | ||
| tRNA | 74 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.4 % | ||
| CheckM Completeness | 98.97 % | ||
| CheckM Contamination | 0.82 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM76324v3 |
| GenBank Assembly Accession | GCA_000763245.3 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000763245.3 [NCBI] |
| BioSample | SAMN02947975 [NCBI] |
| BioProject | PRJNA257157 [NCBI] |
| Submitter | Instituto Oswaldo Cruz |
| Submission Date | 2014-07-31T08:39:23.706 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 287 |
| Isolation Source | catheter tip |
| Geo Location | Brazil |
