Genome Meta Information: Mycobacterium tuberculosis 49-02 (GCA_000786505.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000786505.1 | ||
| HOMD Taxon-ID | HMT-0822 | ||
| Species Name (in use by HOMD) | Mycobacterium tuberculosis | ||
| Organism Name (as deposited) | HMT-822 Mycobacterium tuberculosis 49-02 | ||
| Strain or Isolate | 49-02 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium; s__Mycobacterium tuberculosis |
||
| Sequencing Technology | |||
| Genome Coverage | 47 | ||
| Contigs |
|
||
| Total Sequence Length | 4,412,379 (bp) | ||
| GC Percentage | 65.61 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/505/GCA_000786505.1_MT49-02 | ||
| CDS | 4061 | ||
| Genes | 4117 | ||
| mRNA | 0 | ||
| misc RNA | 0 | ||
| rRNA | 3 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.91 % | ||
| CheckM Completeness | 97.64 % | ||
| CheckM Contamination | 0.37 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | MT49-02 |
| GenBank Assembly Accession | GCA_000786505.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000786505.1 [NCBI] |
| BioSample | SAMEA3865285 [NCBI] |
| BioProject | PRJEB4916 [NCBI] |
| Submitter | JLU |
| Submission Date | 2016-02-05T08:07:27.990 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1427516 |
| Isolation Source | |
| Geo Location | |
