Genome Meta Information: Klebsiella pneumoniae ATCC 13883 (GCA_000788015.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000788015.1 | ||
| HOMD Taxon-ID | HMT-0731 | ||
| Species Name (in use by HOMD) | Klebsiella pneumoniae | ||
| Organism Name (as deposited) | HMT-731 Klebsiella pneumoniae ATCC 13883 | ||
| Strain or Isolate | ATCC 13883 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Klebsiella; s__Klebsiella pneumoniae |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 160 | ||
| Contigs |
|
||
| Total Sequence Length | 5,725,870 (bp) | ||
| GC Percentage | 57.08 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/015/GCA_000788015.1_ASM78801v1 | ||
| CDS | 5456 | ||
| Genes | 5689 | ||
| mRNA | 5689 | ||
| misc RNA | 150 | ||
| rRNA | 10 | ||
| tRNA | 72 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.16 % | ||
| CheckM Completeness | 99.07 % | ||
| CheckM Contamination | 0.19 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM78801v1 |
| GenBank Assembly Accession | GCA_000788015.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000788015.1 [NCBI] |
| BioSample | SAMN03076179 [NCBI] |
| BioProject | PRJNA261239 [NCBI] |
| Submitter | Miami University |
| Submission Date | 2014-09-23T10:35:11.413 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JSZI01 |
| NCBI TaxID | 72407 |
| Isolation Source | not collected |
| Geo Location | not collected |
