Genome Meta Information: Neisseria meningitidis NM3682 (GCA_000800315.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000800315.1 | ||
| HOMD Taxon-ID | HMT-0669 | ||
| Species Name (in use by HOMD) | Neisseria meningitidis | ||
| Organism Name (as deposited) | HMT-669 Neisseria meningitidis NM3682 | ||
| Strain or Isolate | NM3682 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria meningitidis |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 60 | ||
| Contigs |
|
||
| Total Sequence Length | 2,196,674 (bp) | ||
| GC Percentage | 51.64 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/315/GCA_000800315.1_ASM80031v1 | ||
| CDS | 2044 | ||
| Genes | 2135 | ||
| mRNA | 2135 | ||
| misc RNA | 19 | ||
| rRNA | 12 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.29 % | ||
| CheckM Completeness | 98.3 % | ||
| CheckM Contamination | 0.15 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM80031v1 |
| GenBank Assembly Accession | GCA_000800315.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000800315.1 [NCBI] |
| BioSample | SAMN03020600 [NCBI] |
| BioProject | PRJNA260393 [NCBI] |
| Submitter | University of Pittsburgh |
| Submission Date | 2014-09-05T12:47:57.890 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 487 |
| Isolation Source | human |
| Geo Location | United Kingdom: Scotland |
