Genome Meta Information: Listeria monocytogenes NTSN (GCA_000800335.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000800335.1 | ||
| HOMD Taxon-ID | HMT-0825 | ||
| Species Name (in use by HOMD) | Listeria monocytogenes | ||
| Organism Name (as deposited) | HMT-825 Listeria monocytogenes NTSN | ||
| Strain or Isolate | NTSN | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Listeriaceae;g__Listeria; s__Listeria monocytogenes_B |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 29 | ||
| Contigs |
|
||
| Total Sequence Length | 2,904,500 (bp) | ||
| GC Percentage | 38.04 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/335/GCA_000800335.1_ASM80033v1 | ||
| CDS | 2805 | ||
| Genes | 2982 | ||
| mRNA | 2982 | ||
| misc RNA | 91 | ||
| rRNA | 18 | ||
| tRNA | 67 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.51 % | ||
| CheckM Completeness | 99.17 % | ||
| CheckM Contamination | 0.32 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM80033v1 |
| GenBank Assembly Accession | GCA_000800335.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000800335.1 [NCBI] |
| BioSample | SAMN03177401 [NCBI] |
| BioProject | PRJNA267024 [NCBI] |
| Submitter | Yangzhou University |
| Submission Date | 2014-11-12T20:24:06.820 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1639 |
| Isolation Source | |
| Geo Location | China:Jiangsu |
