Genome Meta Information: Nanosynbacter lyticus TM7x (GCA_000803625.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000803625.1 | ||
| HOMD Taxon-ID | HMT-0952 | ||
| Species Name (in use by HOMD) | Nanosynbacter lyticus | ||
| Organism Name (as deposited) | HMT-952 Nanosynbacter lyticus TM7x | ||
| Strain or Isolate | TM7x | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Patescibacteriota;c__Saccharimonadia;o__Saccharimonadales;f__Nanosynbacteraceae;g__Nanosynbacter; s__Nanosynbacter lyticus |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 250 | ||
| Contigs |
|
||
| Total Sequence Length | 705,138 (bp) | ||
| GC Percentage | 44.45 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/625/GCA_000803625.1_ASM80362v1 | ||
| CDS | 711 | ||
| Genes | 761 | ||
| mRNA | 761 | ||
| misc RNA | 4 | ||
| rRNA | 3 | ||
| tRNA | 43 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 87.93 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM80362v1 |
| GenBank Assembly Accession | GCA_000803625.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000803625.1 [NCBI] |
| BioSample | SAMN02693873 [NCBI] |
| BioProject | PRJNA241438 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2014-03-21T17:00:53.720 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 2093824 |
| Isolation Source | |
| Geo Location | USA: Los Angeles, CA |
