Genome Meta Information: Eubacterium limosum ATCC 8486 (GCA_000807675.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000807675.2 | ||
| HOMD Taxon-ID | HMT-0655 | ||
| Species Name (in use by HOMD) | Eubacterium limosum | ||
| Organism Name (as deposited) | HMT-655 Eubacterium limosum ATCC 8486 | ||
| Strain or Isolate | ATCC 8486 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Eubacteriales;f__Eubacteriaceae;g__Eubacterium; s__Eubacterium limosum |
||
| Sequencing Technology | PacBio; Illumina MiSeq | ||
| Genome Coverage | 200 | ||
| Contigs |
|
||
| Total Sequence Length | 4,422,837 (bp) | ||
| GC Percentage | 47.19 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/675/GCA_000807675.2_ASM80767v2 | ||
| CDS | 4127 | ||
| Genes | 4316 | ||
| mRNA | 4316 | ||
| misc RNA | 111 | ||
| rRNA | 16 | ||
| tRNA | 61 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.36 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM80767v2 |
| GenBank Assembly Accession | GCA_000807675.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000807675.2 [NCBI] |
| BioSample | SAMN03265381 [NCBI] |
| BioProject | PRJNA270275 [NCBI] |
| Submitter | Korean Advanced Institute of Science and Technology |
| Submission Date | 2014-12-14T02:52:34.506 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1736 |
| Isolation Source | human intestinal content |
| Geo Location | Germany |
