Genome Meta Information: Pseudomonas aeruginosa DSM 50071 (GCA_001042925.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001042925.1 | ||
| HOMD Taxon-ID | HMT-0536 | ||
| Species Name (in use by HOMD) | Pseudomonas aeruginosa | ||
| Organism Name (as deposited) | HMT-536 Pseudomonas aeruginosa DSM 50071 | ||
| Strain or Isolate | DSM 50071 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas; s__Pseudomonas aeruginosa |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 48.73 | ||
| Contigs |
|
||
| Total Sequence Length | 6,291,043 (bp) | ||
| GC Percentage | 66.56 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/925/GCA_001042925.1_G1273 | ||
| CDS | 5718 | ||
| Genes | 5920 | ||
| mRNA | 5920 | ||
| misc RNA | 126 | ||
| rRNA | 5 | ||
| tRNA | 70 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.82 % | ||
| CheckM Contamination | 0.49 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | G1273 |
| GenBank Assembly Accession | GCA_001042925.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001042925.1 [NCBI] |
| BioSample | SAMN03328803 [NCBI] |
| BioProject | PRJNA274345 [NCBI] |
| Submitter | Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM |
| Submission Date | 2015-02-04T05:09:56.793 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JYLC01 |
| NCBI TaxID | 287 |
| Isolation Source | missing |
| Geo Location | missing |
