Genome Meta Information: Neisseria gonorrhoeae 35/02 (GCA_001047275.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001047275.1 | ||
| HOMD Taxon-ID | HMT-0621 | ||
| Species Name (in use by HOMD) | Neisseria gonorrhoeae | ||
| Organism Name (as deposited) | HMT-621 Neisseria gonorrhoeae 35/02 | ||
| Strain or Isolate | 35/02 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria gonorrhoeae |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 262 | ||
| Contigs |
|
||
| Total Sequence Length | 2,173,235 (bp) | ||
| GC Percentage | 52.6 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/275/GCA_001047275.1_ASM104727v1 | ||
| CDS | 2159 | ||
| Genes | 2248 | ||
| mRNA | 2248 | ||
| misc RNA | 20 | ||
| rRNA | 12 | ||
| tRNA | 56 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.38 % | ||
| CheckM Completeness | 99.02 % | ||
| CheckM Contamination | 0.23 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM104727v1 |
| GenBank Assembly Accession | GCA_001047275.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001047275.1 [NCBI] |
| BioSample | SAMN03459417 [NCBI] |
| BioProject | PRJNA278367 [NCBI] |
| Submitter | Centers for Disease Control and Prevention |
| Submission Date | 2015-04-03T14:35:04.617 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 485 |
| Isolation Source | Missing |
| Geo Location | USA |
