Genome Meta Information: Olsenella sp. HMT-807 F0089 (GCA_001189515.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001189515.2 | ||
| HOMD Taxon-ID | HMT-0807 | ||
| Species Name (in use by HOMD) | Olsenella sp. HMT-807 | ||
| Organism Name (as deposited) | HMT-807 Olsenella sp. HMT-807 F0089 | ||
| Strain or Isolate | F0089 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Olsenella_F; s__Olsenella_F sp001189515 |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 180 | ||
| Contigs |
|
||
| Total Sequence Length | 3,213,585 (bp) | ||
| GC Percentage | 62.08 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/515/GCA_001189515.2_ASM118951v2 | ||
| CDS | 2848 | ||
| Genes | 2914 | ||
| mRNA | 2914 | ||
| misc RNA | 11 | ||
| rRNA | 6 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 86.7 % | ||
| CheckM Contamination | 17.43 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM118951v2 |
| GenBank Assembly Accession | GCA_001189515.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001189515.2 [NCBI] |
| BioSample | SAMN03785053 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2015-06-22T12:16:29.000 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 712411 |
| Isolation Source | Subgingival plaque, periodontal pocket |
| Geo Location | USA: Blacksberg, VA |
