Genome Meta Information: Arsenicicoccus sp. HMT-190 F0371 (GCA_001189535.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001189535.1 | ||
| HOMD Taxon-ID | HMT-0190 | ||
| Species Name (in use by HOMD) | Arsenicicoccus sp. HMT-190 | ||
| Organism Name (as deposited) | HMT-190 Arsenicicoccus sp. HMT-190 F0371 | ||
| Strain or Isolate | F0371 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Dermatophilaceae;g__Arsenicicoccus; s__Arsenicicoccus sp001189535 |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 98 | ||
| Contigs |
|
||
| Total Sequence Length | 3,525,271 (bp) | ||
| GC Percentage | 72.73 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/535/GCA_001189535.1_ASM118953v1 | ||
| CDS | 3247 | ||
| Genes | 3329 | ||
| mRNA | 3329 | ||
| misc RNA | 24 | ||
| rRNA | 6 | ||
| tRNA | 51 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.44 % | ||
| CheckM Contamination | 0.57 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM118953v1 |
| GenBank Assembly Accession | GCA_001189535.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001189535.1 [NCBI] |
| BioSample | SAMN03704031 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2015-05-21T12:25:08.000 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1658671 |
| Isolation Source | Subgingival plaque, periodontal pocket |
| Geo Location | USA: Boston, MA |
