Genome Meta Information: Prevotella fusca W1435 (GCA_001262015.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001262015.1 | ||
| HOMD Taxon-ID | HMT-0782 | ||
| Species Name (in use by HOMD) | Prevotella fusca | ||
| Organism Name (as deposited) | HMT-782 Prevotella fusca W1435 | ||
| Strain or Isolate | W1435 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella fusca |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 117 | ||
| Contigs |
|
||
| Total Sequence Length | 3,261,806 (bp) | ||
| GC Percentage | 44.12 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/015/GCA_001262015.1_ASM126201v1 | ||
| CDS | 2730 | ||
| Genes | 2802 | ||
| mRNA | 2802 | ||
| misc RNA | 8 | ||
| rRNA | 13 | ||
| tRNA | 50 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.97 % | ||
| CheckM Completeness | 99.29 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM126201v1 |
| GenBank Assembly Accession | GCA_001262015.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001262015.1 [NCBI] |
| BioSample | SAMN03704035 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2015-05-21T12:25:09.000 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1236517 |
| Isolation Source | Periodontal pocket |
| Geo Location | United Kingdom: Cardiff |
