Genome Meta Information: Schaalia meyeri W712 (GCA_001262055.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001262055.1 | ||
| HOMD Taxon-ID | HMT-0671 | ||
| Species Name (in use by HOMD) | Schaalia meyeri | ||
| Organism Name (as deposited) | HMT-671 Schaalia meyeri W712 | ||
| Strain or Isolate | W712 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Pauljensenia; s__Pauljensenia meyeri |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 197 | ||
| Contigs |
|
||
| Total Sequence Length | 2,049,088 (bp) | ||
| GC Percentage | 65.51 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/055/GCA_001262055.1_ASM126205v1 | ||
| CDS | 1752 | ||
| Genes | 1817 | ||
| mRNA | 1817 | ||
| misc RNA | 6 | ||
| rRNA | 9 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.02 % | ||
| CheckM Completeness | 99.67 % | ||
| CheckM Contamination | 0.47 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM126205v1 |
| GenBank Assembly Accession | GCA_001262055.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001262055.1 [NCBI] |
| BioSample | SAMN03704036 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2015-05-21T12:25:09.000 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 52773 |
| Isolation Source | Periodontal pocket |
| Geo Location | United Kingdom: London |
