Genome Meta Information: Ottowia sp. HMT-894 W10237 (GCA_001262075.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001262075.1 | ||
| HOMD Taxon-ID | HMT-0894 | ||
| Species Name (in use by HOMD) | Ottowia sp. HMT-894 | ||
| Organism Name (as deposited) | HMT-894 Ottowia sp. HMT-894 W10237 | ||
| Strain or Isolate | W10237 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ottowia; s__Ottowia massiliensis |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 105 | ||
| Contigs |
|
||
| Total Sequence Length | 2,925,783 (bp) | ||
| GC Percentage | 63.59 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/075/GCA_001262075.1_ASM126207v1 | ||
| CDS | 2589 | ||
| Genes | 2666 | ||
| mRNA | 2666 | ||
| misc RNA | 15 | ||
| rRNA | 9 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 91.87 % | ||
| CheckM Contamination | 0.98 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM126207v1 |
| GenBank Assembly Accession | GCA_001262075.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001262075.1 [NCBI] |
| BioSample | SAMN03704033 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2015-05-21T12:25:08.000 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1658672 |
| Isolation Source | Subgingival plaque, gingival sulcus |
| Geo Location | United Kingdom: London |
