Genome Meta Information: Cupriavidus gilardii CR3 (GCA_001281465.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001281465.1 | ||
| HOMD Taxon-ID | HMT-0027 | ||
| Species Name (in use by HOMD) | Cupriavidus gilardii | ||
| Organism Name (as deposited) | HMT-027 Cupriavidus gilardii CR3 | ||
| Strain or Isolate | CR3 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Cupriavidus; s__Cupriavidus gilardii |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 43.53 | ||
| Contigs |
|
||
| Total Sequence Length | 5,578,743 (bp) | ||
| GC Percentage | 67.55 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/465/GCA_001281465.1_ASM128146v1 | ||
| CDS | 5127 | ||
| Genes | 5226 | ||
| mRNA | 5226 | ||
| misc RNA | 21 | ||
| rRNA | 12 | ||
| tRNA | 65 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.86 % | ||
| CheckM Completeness | 81.94 % | ||
| CheckM Contamination | 1.8 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM128146v1 |
| GenBank Assembly Accession | GCA_001281465.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001281465.1 [NCBI] |
| BioSample | SAMN02665997 [NCBI] |
| BioProject | PRJNA183450 [NCBI] |
| Submitter | Key Laboratory for Wetland Ecology and Vegetation Restoration of National Environmental Protection, Norhteast Normal Univesity, China |
| Submission Date | 2014-02-26T21:50:53.210 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1267562 |
| Isolation Source | Tar Pits |
| Geo Location | USA: Rancho La Brea, Los Angel |
