Taxon Table | Genome Table
Genome Meta Information:
Lactococcus
lactis
ATCC 19435 (GCA_001456385.1)
| HOMD Genome-ID |
GCA_001456385.1
|
| HOMD Taxon-ID |
HMT-0804
|
| Species Name (in use by HOMD) |
Lactococcus lactis
|
| Organism Name (as deposited) |
HMT-804 Lactococcus lactis ATCC 19435
|
| Strain or Isolate |
ATCC 19435
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Lactococcus;
s__Lactococcus lactis |
| Sequencing Technology |
Illumina HiSeq
|
| Genome Coverage |
50
|
| Contigs |
Number of Contigs: 171
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,547,291 (bp) |
| GC Percentage |
35.29
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/385/GCA_001456385.1_ASM145638v1
|
| CDS |
2503
|
| Genes |
2610
|
| mRNA |
2610
|
| misc RNA |
43
|
| rRNA |
10
|
| tRNA |
53
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
99.98 %
|
| CheckM Completeness |
96.84 %
|
| CheckM Contamination |
1.01 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM145638v1
|
| GenBank Assembly Accession |
GCA_001456385.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_001456385.1
[NCBI]
|
| BioSample |
SAMN04018792
[NCBI]
|
| BioProject |
PRJNA294255
[NCBI]
|
| Submitter |
Radboudumc
|
| Submission Date |
2015-08-31T05:13:11.000
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
LKLC01
|
| NCBI TaxID |
1360
|
| Isolation Source |
Dairy starter
|
| Geo Location |
Netherlands
|
