Taxon Table | Genome Table
Genome Meta Information:
Roseomonas
mucosa
AU37 (GCA_001466485.2)
| HOMD Genome-ID |
GCA_001466485.2
|
| HOMD Taxon-ID |
HMT-0245
|
| Species Name (in use by HOMD) |
Roseomonas mucosa
|
| Organism Name (as deposited) |
HMT-245 Roseomonas mucosa AU37
|
| Strain or Isolate |
AU37
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Roseomonas;
s__Roseomonas mucosa |
| Sequencing Technology |
Illumina HiSeq
|
| Genome Coverage |
50
|
| Contigs |
Number of Contigs: 249
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
4,741,248 (bp) |
| GC Percentage |
70.45
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/485/GCA_001466485.2_ASM146648v2
|
| CDS |
4244
|
| Genes |
4331
|
| mRNA |
4331
|
| misc RNA |
20
|
| rRNA |
3
|
| tRNA |
63
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
99.38 %
|
| CheckM Completeness |
97.24 %
|
| CheckM Contamination |
4.23 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
2 Contigs
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM146648v2
|
| GenBank Assembly Accession |
GCA_001466485.2
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_001466485.2
[NCBI]
|
| BioSample |
SAMN04169051
[NCBI]
|
| BioProject |
PRJNA298945
[NCBI]
|
| Submitter |
Griffith University
|
| Submission Date |
2015-10-16T00:50:03.000
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
LLWF02
|
| NCBI TaxID |
207340
|
| Isolation Source |
peripheral intravenous catheter tip on left arm for 7 days with standard polyure
|
| Geo Location |
Australia: Brisbane
|
