Genome Meta Information: Olsenella phocaeensis DNF00959 (GCA_001553055.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001553055.1 | ||
| HOMD Taxon-ID | HMT-0809 | ||
| Species Name (in use by HOMD) | Olsenella phocaeensis | ||
| Organism Name (as deposited) | HMT-809 Olsenella phocaeensis DNF00959 | ||
| Strain or Isolate | DNF00959 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Olsenella_I; s__Olsenella_I phocaeensis |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 83 | ||
| Contigs |
|
||
| Total Sequence Length | 2,134,018 (bp) | ||
| GC Percentage | 66.66 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/055/GCA_001553055.1_ASM155305v1 | ||
| CDS | 1841 | ||
| Genes | 1905 | ||
| mRNA | 1905 | ||
| misc RNA | 11 | ||
| rRNA | 3 | ||
| tRNA | 50 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 97.56 % | ||
| CheckM Contamination | 1.31 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM155305v1 |
| GenBank Assembly Accession | GCA_001553055.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001553055.1 [NCBI] |
| BioSample | SAMN03855786 [NCBI] |
| BioProject | PRJNA246512 [NCBI] |
| Submitter | The Genome Institute at Washington University |
| Submission Date | 2015-07-11T08:05:18.470 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LSDE01 |
| NCBI TaxID | 1476999 |
| Isolation Source | vagina |
| Geo Location | |
