Genome Meta Information: Megasphaera lornae DNF00751 (GCA_001553395.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001553395.1 | ||
| HOMD Taxon-ID | HMT-0841 | ||
| Species Name (in use by HOMD) | Megasphaera lornae | ||
| Organism Name (as deposited) | HMT-841 Megasphaera lornae DNF00751 | ||
| Strain or Isolate | DNF00751 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Megasphaeraceae;g__Megasphaera_C; s__Megasphaera_C lornae |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 120 | ||
| Contigs |
|
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| Total Sequence Length | 1,729,361 (bp) | ||
| GC Percentage | 46.11 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/395/GCA_001553395.1_ASM155339v1 | ||
| CDS | 1548 | ||
| Genes | 1622 | ||
| mRNA | 1622 | ||
| misc RNA | 25 | ||
| rRNA | 3 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM155339v1 |
| GenBank Assembly Accession | GCA_001553395.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001553395.1 [NCBI] |
| BioSample | SAMN04108635 [NCBI] |
| BioProject | PRJNA257377 [NCBI] |
| Submitter | The Genome Institute at Washington University |
| Submission Date | 2015-09-23T16:10:49.257 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LSDS01 |
| NCBI TaxID | 1384082 |
| Isolation Source | vagina |
| Geo Location | |
